Protein–RNA interactions for Protein: O43448

KCNAB3, Voltage-gated potassium channel subunit beta-3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNAB3O43448 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.4■□□□□ 0.54
KCNAB3O43448 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
KCNAB3O43448 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.4■□□□□ 0.54
KCNAB3O43448 MIR4466-201ENST00000606121 54 ntBASIC18.4■□□□□ 0.54
KCNAB3O43448 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
KCNAB3O43448 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 AC139530.1-201ENST00000575312 1977 ntBASIC18.4■□□□□ 0.54
KCNAB3O43448 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KCNAB3O43448 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNAB3O43448 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KCNAB3O43448 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KCNAB3O43448 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
KCNAB3O43448 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KCNAB3O43448 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KCNAB3O43448 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KCNAB3O43448 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNAB3O43448 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNAB3O43448 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNAB3O43448 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KCNAB3O43448 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNAB3O43448 AL117332.1-201ENST00000622628 974 ntBASIC18.39■□□□□ 0.53
KCNAB3O43448 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
KCNAB3O43448 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNAB3O43448 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNAB3O43448 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNAB3O43448 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNAB3O43448 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNAB3O43448 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNAB3O43448 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.38■□□□□ 0.53
KCNAB3O43448 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KCNAB3O43448 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNAB3O43448 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KCNAB3O43448 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.38■□□□□ 0.53
KCNAB3O43448 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNAB3O43448 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNAB3O43448 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNAB3O43448 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNAB3O43448 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNAB3O43448 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNAB3O43448 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KCNAB3O43448 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNAB3O43448 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNAB3O43448 AL162430.1-201ENST00000480705 870 ntBASIC18.37■□□□□ 0.53
KCNAB3O43448 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNAB3O43448 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KCNAB3O43448 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNAB3O43448 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNAB3O43448 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNAB3O43448 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNAB3O43448 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNAB3O43448 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
KCNAB3O43448 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KCNAB3O43448 PBX2P1-201ENST00000493219 1291 ntBASIC18.36■□□□□ 0.53
KCNAB3O43448 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.36■□□□□ 0.53
KCNAB3O43448 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNAB3O43448 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNAB3O43448 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNAB3O43448 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.36■□□□□ 0.53
KCNAB3O43448 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.36■□□□□ 0.53
KCNAB3O43448 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.36■□□□□ 0.53
KCNAB3O43448 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
KCNAB3O43448 RARRES2P11-201ENST00000635158 484 ntBASIC18.36■□□□□ 0.53
KCNAB3O43448 AC092053.2-201ENST00000640557 1818 ntBASIC18.36■□□□□ 0.53
KCNAB3O43448 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KCNAB3O43448 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNAB3O43448 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
KCNAB3O43448 ESRRAP2-201ENST00000418437 1549 ntBASIC18.35■□□□□ 0.53
KCNAB3O43448 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.35■□□□□ 0.53
KCNAB3O43448 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNAB3O43448 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNAB3O43448 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
KCNAB3O43448 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KCNAB3O43448 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.34■□□□□ 0.53
KCNAB3O43448 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.34■□□□□ 0.53
KCNAB3O43448 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNAB3O43448 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KCNAB3O43448 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KCNAB3O43448 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms