Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC24.34■■□□□ 1.49
TNRC18O15417 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
TNRC18O15417 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC24.34■■□□□ 1.49
TNRC18O15417 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNRC18O15417 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TNRC18O15417 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TNRC18O15417 BX276092.2-201ENST00000417668 665 ntBASIC24.33■■□□□ 1.49
TNRC18O15417 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TNRC18O15417 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TNRC18O15417 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TNRC18O15417 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TNRC18O15417 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TNRC18O15417 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TNRC18O15417 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNRC18O15417 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNRC18O15417 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TNRC18O15417 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TNRC18O15417 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.32■■□□□ 1.48
TNRC18O15417 FAM197Y4-202ENST00000622692 608 ntBASIC24.32■■□□□ 1.48
TNRC18O15417 AC068338.2-201ENST00000563278 1430 ntBASIC24.32■■□□□ 1.48
TNRC18O15417 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNRC18O15417 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.31■■□□□ 1.48
TNRC18O15417 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.31■■□□□ 1.48
TNRC18O15417 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TNRC18O15417 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
TNRC18O15417 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.31■■□□□ 1.48
TNRC18O15417 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TNRC18O15417 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TNRC18O15417 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
TNRC18O15417 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNRC18O15417 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNRC18O15417 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNRC18O15417 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNRC18O15417 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TNRC18O15417 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
TNRC18O15417 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNRC18O15417 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TNRC18O15417 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC24.29■■□□□ 1.48
TNRC18O15417 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC24.29■■□□□ 1.48
TNRC18O15417 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC24.29■■□□□ 1.48
TNRC18O15417 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNRC18O15417 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNRC18O15417 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TNRC18O15417 AC008403.3-201ENST00000598924 454 ntBASIC24.29■■□□□ 1.48
TNRC18O15417 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TNRC18O15417 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
TNRC18O15417 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TNRC18O15417 AC097658.1-201ENST00000475555 843 ntBASIC24.28■■□□□ 1.48
TNRC18O15417 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TNRC18O15417 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.28■■□□□ 1.48
TNRC18O15417 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.28■■□□□ 1.48
TNRC18O15417 AC091874.3-201ENST00000512672 1195 ntBASIC24.28■■□□□ 1.48
TNRC18O15417 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TNRC18O15417 STX4-202ENST00000394998 1498 ntTSL 2 BASIC24.28■■□□□ 1.48
TNRC18O15417 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TNRC18O15417 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC24.27■■□□□ 1.48
TNRC18O15417 AC093787.1-201ENST00000450396 207 ntBASIC24.27■■□□□ 1.48
TNRC18O15417 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC24.27■■□□□ 1.48
TNRC18O15417 RPPH1-201ENST00000516869 333 ntBASIC24.27■■□□□ 1.48
TNRC18O15417 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC24.27■■□□□ 1.48
TNRC18O15417 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TNRC18O15417 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.27■■□□□ 1.48
TNRC18O15417 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TNRC18O15417 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC24.27■■□□□ 1.48
TNRC18O15417 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC24.27■■□□□ 1.48
TNRC18O15417 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TNRC18O15417 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.27■■□□□ 1.48
TNRC18O15417 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC24.27■■□□□ 1.48
TNRC18O15417 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.26■■□□□ 1.47
TNRC18O15417 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.26■■□□□ 1.47
TNRC18O15417 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TNRC18O15417 ABCB10P1-201ENST00000614297 2181 ntBASIC24.26■■□□□ 1.47
TNRC18O15417 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.25■■□□□ 1.47
TNRC18O15417 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TNRC18O15417 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.25■■□□□ 1.47
TNRC18O15417 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TNRC18O15417 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TNRC18O15417 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC24.25■■□□□ 1.47
TNRC18O15417 AC133561.5-201ENST00000635547 218 ntBASIC24.25■■□□□ 1.47
TNRC18O15417 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TNRC18O15417 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TNRC18O15417 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TNRC18O15417 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.25■■□□□ 1.47
TNRC18O15417 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.25■■□□□ 1.47
TNRC18O15417 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC24.25■■□□□ 1.47
TNRC18O15417 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.25■■□□□ 1.47
TNRC18O15417 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms