Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NPC1O15118 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NPC1O15118 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
NPC1O15118 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NPC1O15118 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.14■■□□□ 1.13
NPC1O15118 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPC1O15118 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPC1O15118 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPC1O15118 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.14■■□□□ 1.13
NPC1O15118 AC092068.2-201ENST00000590491 1708 ntBASIC22.14■■□□□ 1.13
NPC1O15118 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.14■■□□□ 1.13
NPC1O15118 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NPC1O15118 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.14■■□□□ 1.13
NPC1O15118 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.14■■□□□ 1.13
NPC1O15118 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPC1O15118 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
NPC1O15118 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPC1O15118 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
NPC1O15118 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.13■■□□□ 1.13
NPC1O15118 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.13■■□□□ 1.13
NPC1O15118 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.13■■□□□ 1.13
NPC1O15118 AC004911.1-201ENST00000416316 871 ntBASIC22.13■■□□□ 1.13
NPC1O15118 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.13■■□□□ 1.13
NPC1O15118 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.13■■□□□ 1.13
NPC1O15118 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.13■■□□□ 1.13
NPC1O15118 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.13■■□□□ 1.13
NPC1O15118 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
NPC1O15118 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPC1O15118 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NPC1O15118 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPC1O15118 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.12■■□□□ 1.13
NPC1O15118 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPC1O15118 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
NPC1O15118 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPC1O15118 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.12■■□□□ 1.13
NPC1O15118 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPC1O15118 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC22.12■■□□□ 1.13
NPC1O15118 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.12■■□□□ 1.13
NPC1O15118 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC22.12■■□□□ 1.13
NPC1O15118 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.12■■□□□ 1.13
NPC1O15118 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
NPC1O15118 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NPC1O15118 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
NPC1O15118 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NPC1O15118 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
NPC1O15118 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
NPC1O15118 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC22.11■■□□□ 1.13
NPC1O15118 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
NPC1O15118 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.11■■□□□ 1.13
NPC1O15118 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.11■■□□□ 1.13
NPC1O15118 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.11■■□□□ 1.13
NPC1O15118 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
NPC1O15118 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
NPC1O15118 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
NPC1O15118 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.11■■□□□ 1.13
NPC1O15118 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.1■■□□□ 1.13
NPC1O15118 DUSP8P3-201ENST00000399571 1760 ntBASIC22.1■■□□□ 1.13
NPC1O15118 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
NPC1O15118 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPC1O15118 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.1■■□□□ 1.13
NPC1O15118 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.1■■□□□ 1.13
NPC1O15118 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
NPC1O15118 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.1■■□□□ 1.13
NPC1O15118 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPC1O15118 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPC1O15118 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
NPC1O15118 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
NPC1O15118 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
NPC1O15118 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPC1O15118 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPC1O15118 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
NPC1O15118 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPC1O15118 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22.09■■□□□ 1.13
NPC1O15118 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.09■■□□□ 1.13
NPC1O15118 KRT19P1-201ENST00000405746 1186 ntBASIC22.09■■□□□ 1.13
NPC1O15118 AC006015.1-201ENST00000429970 570 ntBASIC22.09■■□□□ 1.13
NPC1O15118 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC22.09■■□□□ 1.13
NPC1O15118 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPC1O15118 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.09■■□□□ 1.13
NPC1O15118 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
NPC1O15118 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.09■■□□□ 1.13
NPC1O15118 AP004607.4-201ENST00000530158 1459 ntBASIC22.09■■□□□ 1.13
NPC1O15118 ANOS2P-203ENST00000472227 1816 ntBASIC22.08■■□□□ 1.13
NPC1O15118 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
NPC1O15118 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
NPC1O15118 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.08■■□□□ 1.13
NPC1O15118 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.08■■□□□ 1.13
NPC1O15118 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.08■■□□□ 1.13
NPC1O15118 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.08■■□□□ 1.12
NPC1O15118 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
NPC1O15118 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
NPC1O15118 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms