Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 AL117332.1-201ENST00000622628 974 ntBASIC20.31■□□□□ 0.84
AP3D1O14617 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
AP3D1O14617 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AP3D1O14617 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
AP3D1O14617 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
AP3D1O14617 AL356441.2-201ENST00000443009 864 ntBASIC20.3■□□□□ 0.84
AP3D1O14617 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.3■□□□□ 0.84
AP3D1O14617 DUX4L4-201ENST00000566884 1269 ntBASIC20.3■□□□□ 0.84
AP3D1O14617 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.3■□□□□ 0.84
AP3D1O14617 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
AP3D1O14617 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AP3D1O14617 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
AP3D1O14617 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
AP3D1O14617 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AP3D1O14617 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3D1O14617 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.28■□□□□ 0.84
AP3D1O14617 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3D1O14617 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.28■□□□□ 0.84
AP3D1O14617 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.28■□□□□ 0.84
AP3D1O14617 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3D1O14617 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AP3D1O14617 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
AP3D1O14617 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.27■□□□□ 0.84
AP3D1O14617 AC087742.1-201ENST00000575880 1738 ntBASIC20.27■□□□□ 0.84
AP3D1O14617 AC092053.2-201ENST00000640557 1818 ntBASIC20.27■□□□□ 0.84
AP3D1O14617 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
AP3D1O14617 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
AP3D1O14617 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 MIR3621-201ENST00000580529 85 ntBASIC20.27■□□□□ 0.84
AP3D1O14617 AL356740.2-201ENST00000601559 647 ntBASIC20.27■□□□□ 0.84
AP3D1O14617 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AP3D1O14617 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AP3D1O14617 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP3D1O14617 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
AP3D1O14617 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.27■□□□□ 0.84
AP3D1O14617 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.27■□□□□ 0.83
AP3D1O14617 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
AP3D1O14617 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.27■□□□□ 0.83
AP3D1O14617 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.27■□□□□ 0.83
AP3D1O14617 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.26■□□□□ 0.83
AP3D1O14617 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
AP3D1O14617 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
AP3D1O14617 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AP3D1O14617 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.26■□□□□ 0.83
AP3D1O14617 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
AP3D1O14617 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.26■□□□□ 0.83
AP3D1O14617 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
AP3D1O14617 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP3D1O14617 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.26■□□□□ 0.83
AP3D1O14617 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.25■□□□□ 0.83
AP3D1O14617 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
AP3D1O14617 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.25■□□□□ 0.83
AP3D1O14617 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP3D1O14617 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms