Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC23.63■■□□□ 1.37
SOX1O00570 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SOX1O00570 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SOX1O00570 AC010536.3-201ENST00000620306 533 ntBASIC23.63■■□□□ 1.37
SOX1O00570 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 CYP2T1P-201ENST00000432607 1285 ntBASIC23.62■■□□□ 1.37
SOX1O00570 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC23.62■■□□□ 1.37
SOX1O00570 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 RPS20-210ENST00000523936 899 ntTSL 2 BASIC23.62■■□□□ 1.37
SOX1O00570 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
SOX1O00570 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SOX1O00570 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SOX1O00570 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SOX1O00570 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.61■■□□□ 1.37
SOX1O00570 AP001160.3-201ENST00000601484 763 ntBASIC23.61■■□□□ 1.37
SOX1O00570 MIR6089-201ENST00000616698 64 ntBASIC23.61■■□□□ 1.37
SOX1O00570 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SOX1O00570 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SOX1O00570 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SOX1O00570 AC093787.1-201ENST00000450396 207 ntBASIC23.6■■□□□ 1.37
SOX1O00570 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SOX1O00570 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SOX1O00570 UNC93B5-201ENST00000530315 699 ntBASIC23.6■■□□□ 1.37
SOX1O00570 AL359736.2-201ENST00000621992 437 ntBASIC23.6■■□□□ 1.37
SOX1O00570 FP325331.1-202ENST00000623531 1380 ntBASIC23.6■■□□□ 1.37
SOX1O00570 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SOX1O00570 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.6■■□□□ 1.37
SOX1O00570 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SOX1O00570 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SOX1O00570 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SOX1O00570 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SOX1O00570 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.59■■□□□ 1.37
SOX1O00570 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SOX1O00570 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.59■■□□□ 1.37
SOX1O00570 WDR88-203ENST00000592765 651 ntTSL 5 BASIC23.59■■□□□ 1.37
SOX1O00570 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SOX1O00570 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SOX1O00570 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SOX1O00570 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SOX1O00570 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
SOX1O00570 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SOX1O00570 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SOX1O00570 MIR718-201ENST00000390190 70 ntBASIC23.58■■□□□ 1.37
SOX1O00570 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.58■■□□□ 1.37
SOX1O00570 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC23.58■■□□□ 1.37
SOX1O00570 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC23.58■■□□□ 1.37
SOX1O00570 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.58■■□□□ 1.37
SOX1O00570 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
SOX1O00570 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.58■■□□□ 1.36
SOX1O00570 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
SOX1O00570 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SOX1O00570 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 AC139426.1-201ENST00000568218 2529 ntBASIC23.57■■□□□ 1.36
SOX1O00570 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.57■■□□□ 1.36
SOX1O00570 AC097658.1-201ENST00000475555 843 ntBASIC23.57■■□□□ 1.36
SOX1O00570 AC026366.1-201ENST00000488803 879 ntBASIC23.57■■□□□ 1.36
SOX1O00570 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.57■■□□□ 1.36
SOX1O00570 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC23.57■■□□□ 1.36
SOX1O00570 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.57■■□□□ 1.36
SOX1O00570 AC068338.2-201ENST00000563278 1430 ntBASIC23.57■■□□□ 1.36
SOX1O00570 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SOX1O00570 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC23.57■■□□□ 1.36
SOX1O00570 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SOX1O00570 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SOX1O00570 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SOX1O00570 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
SOX1O00570 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SOX1O00570 SNORA78-201ENST00000459373 127 ntBASIC23.56■■□□□ 1.36
SOX1O00570 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.56■■□□□ 1.36
SOX1O00570 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.56■■□□□ 1.36
SOX1O00570 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
SOX1O00570 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SOX1O00570 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.56■■□□□ 1.36
SOX1O00570 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.56■■□□□ 1.36
SOX1O00570 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SOX1O00570 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SOX1O00570 SLC6A10P-202ENST00000431994 2058 ntBASIC23.55■■□□□ 1.36
SOX1O00570 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.55■■□□□ 1.36
SOX1O00570 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SOX1O00570 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SOX1O00570 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 337.8 ms