Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L29-201ENST00000425409 679 ntBASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AC007952.6-201ENST00000573168 2673 ntBASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AC003957.1-201ENST00000625108 2673 ntBASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ALDH1A3-203ENST00000557963 1670 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L13-201ENST00000554103 1267 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AC044849.2-201ENST00000606596 710 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L15-201ENST00000611059 1267 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L23-201ENST00000615195 1269 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L24-201ENST00000617576 1269 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L22-201ENST00000618238 1269 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L20-201ENST00000619712 1269 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L21-201ENST00000622058 1269 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L10-201ENST00000622460 1267 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 DUX4L25-201ENST00000624915 1269 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AL157384.1-201ENST00000445995 2473 ntBASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
TMEM256-PLSCR3K7ERE1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms