Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CCDC189A1A4V9 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CCDC189A1A4V9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC189A1A4V9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC189A1A4V9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 AC009102.2-201ENST00000606772 1639 ntBASIC21.71■■□□□ 1.07
CCDC189A1A4V9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC189A1A4V9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
CCDC189A1A4V9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 AC010997.5-201ENST00000609182 354 ntBASIC21.7■■□□□ 1.06
CCDC189A1A4V9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
CCDC189A1A4V9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC189A1A4V9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 RARRES2P1-201ENST00000474487 481 ntBASIC21.68■■□□□ 1.06
CCDC189A1A4V9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC189A1A4V9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms