Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLRN2A0PK11 MIR663A-201ENST00000385250 93 ntBASIC26.14■■□□□ 1.78
CLRN2A0PK11 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLRN2A0PK11 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC26.14■■□□□ 1.78
CLRN2A0PK11 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.14■■□□□ 1.78
CLRN2A0PK11 WT1-AS_3.1-201ENST00000613262 234 ntBASIC26.14■■□□□ 1.78
CLRN2A0PK11 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.13■■□□□ 1.77
CLRN2A0PK11 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLRN2A0PK11 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.13■■□□□ 1.77
CLRN2A0PK11 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.13■■□□□ 1.77
CLRN2A0PK11 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLRN2A0PK11 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLRN2A0PK11 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
CLRN2A0PK11 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLRN2A0PK11 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.12■■□□□ 1.77
CLRN2A0PK11 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC26.12■■□□□ 1.77
CLRN2A0PK11 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CLRN2A0PK11 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
CLRN2A0PK11 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
CLRN2A0PK11 CPT2-209ENST00000636935 803 ntTSL 5 BASIC26.12■■□□□ 1.77
CLRN2A0PK11 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CLRN2A0PK11 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLRN2A0PK11 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLRN2A0PK11 USP45-205ENST00000472914 1617 ntTSL 5 BASIC26.11■■□□□ 1.77
CLRN2A0PK11 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLRN2A0PK11 NCF1B-203ENST00000435988 1254 ntBASIC26.11■■□□□ 1.77
CLRN2A0PK11 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC26.11■■□□□ 1.77
CLRN2A0PK11 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CLRN2A0PK11 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.11■■□□□ 1.77
CLRN2A0PK11 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC26.11■■□□□ 1.77
CLRN2A0PK11 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
CLRN2A0PK11 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
CLRN2A0PK11 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC26.1■■□□□ 1.77
CLRN2A0PK11 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.1■■□□□ 1.77
CLRN2A0PK11 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.1■■□□□ 1.77
CLRN2A0PK11 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26.1■■□□□ 1.77
CLRN2A0PK11 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
CLRN2A0PK11 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
CLRN2A0PK11 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
CLRN2A0PK11 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CLRN2A0PK11 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.09■■□□□ 1.77
CLRN2A0PK11 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC26.09■■□□□ 1.77
CLRN2A0PK11 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CLRN2A0PK11 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.09■■□□□ 1.77
CLRN2A0PK11 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CLRN2A0PK11 METTL26-203ENST00000397664 604 ntTSL 2 BASIC26.08■■□□□ 1.77
CLRN2A0PK11 KRT18P11-201ENST00000435214 1283 ntBASIC26.08■■□□□ 1.77
CLRN2A0PK11 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.08■■□□□ 1.77
CLRN2A0PK11 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CLRN2A0PK11 AL139125.2-201ENST00000623134 1869 ntBASIC26.08■■□□□ 1.77
CLRN2A0PK11 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CLRN2A0PK11 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CLRN2A0PK11 ABHD17AP1-201ENST00000358206 933 ntBASIC26.07■■□□□ 1.76
CLRN2A0PK11 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CLRN2A0PK11 MFSD11-216ENST00000590393 1141 ntBASIC26.07■■□□□ 1.76
CLRN2A0PK11 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CLRN2A0PK11 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CLRN2A0PK11 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
CLRN2A0PK11 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC26.06■■□□□ 1.76
CLRN2A0PK11 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLRN2A0PK11 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLRN2A0PK11 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLRN2A0PK11 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CLRN2A0PK11 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
CLRN2A0PK11 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CLRN2A0PK11 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 AC104187.1-201ENST00000607510 612 ntBASIC26.05■■□□□ 1.76
CLRN2A0PK11 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLRN2A0PK11 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CLRN2A0PK11 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.05■■□□□ 1.76
CLRN2A0PK11 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CLRN2A0PK11 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.04■■□□□ 1.76
CLRN2A0PK11 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
CLRN2A0PK11 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC26.04■■□□□ 1.76
CLRN2A0PK11 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC26.04■■□□□ 1.76
CLRN2A0PK11 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CLRN2A0PK11 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.04■■□□□ 1.76
CLRN2A0PK11 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
CLRN2A0PK11 DUSP8P3-201ENST00000399571 1760 ntBASIC26.03■■□□□ 1.76
CLRN2A0PK11 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.03■■□□□ 1.76
CLRN2A0PK11 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLRN2A0PK11 GPX1P1-201ENST00000388829 606 ntBASIC26.03■■□□□ 1.76
CLRN2A0PK11 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CLRN2A0PK11 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLRN2A0PK11 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CLRN2A0PK11 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms