Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHISA3A0PJX4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 LINC01529-204ENST00000636474 1715 ntBASIC19.06■□□□□ 0.64
SHISA3A0PJX4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SHISA3A0PJX4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.05■□□□□ 0.64
SHISA3A0PJX4 THA1P-201ENST00000590384 1145 ntBASIC19.05■□□□□ 0.64
SHISA3A0PJX4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.05■□□□□ 0.64
SHISA3A0PJX4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 U85056.1-201ENST00000616429 682 ntBASIC19.04■□□□□ 0.64
SHISA3A0PJX4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHISA3A0PJX4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.03■□□□□ 0.64
SHISA3A0PJX4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 LINC01521-201ENST00000504184 1943 ntBASIC19.03■□□□□ 0.64
SHISA3A0PJX4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHISA3A0PJX4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 HSD17B1P1-201ENST00000590052 955 ntBASIC19.02■□□□□ 0.64
SHISA3A0PJX4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHISA3A0PJX4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHISA3A0PJX4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.63
SHISA3A0PJX4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.02■□□□□ 0.63
SHISA3A0PJX4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHISA3A0PJX4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.02■□□□□ 0.63
SHISA3A0PJX4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 CA15P2-201ENST00000611168 834 ntBASIC19.01■□□□□ 0.63
SHISA3A0PJX4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHISA3A0PJX4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms