Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 FAM99A-202ENST00000538190 1989 ntBASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 LONRF2P2-201ENST00000439212 571 ntBASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAV34A0A0B4J273 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 DUX4L9-201ENST00000449051 1259 ntBASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAV34A0A0B4J273 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAV34A0A0B4J273 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 USF2-207ENST00000595068 1612 ntTSL 5 BASIC16.78■□□□□ 0.28
TRAV34A0A0B4J273 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 AC005229.4-201ENST00000610085 2198 ntBASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 AC010542.4-201ENST00000563151 1910 ntBASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 LBH-205ENST00000407930 756 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV34A0A0B4J273 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV34A0A0B4J273 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV34A0A0B4J273 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV34A0A0B4J273 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV34A0A0B4J273 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TRAV34A0A0B4J273 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms