Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV16A0A0A6YYK6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
TRAV16A0A0A6YYK6 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 AC103724.3-201ENST00000564481 992 ntBASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV16A0A0A6YYK6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 BX664725.1-201ENST00000438252 379 ntBASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 AC103834.1-201ENST00000520383 144 ntBASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV16A0A0A6YYK6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 FBXW4P1-201ENST00000426721 2239 ntBASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 RARRES2P1-201ENST00000474487 481 ntBASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 MIR4281-201ENST00000580852 62 ntBASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV16A0A0A6YYK6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV16A0A0A6YYK6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 AL161729.1-201ENST00000604104 1402 ntBASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV16A0A0A6YYK6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms