Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV26-1A0A087WT03 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 DUSP8P5-201ENST00000422884 1815 ntBASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 AC006455.2-201ENST00000429931 906 ntBASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV26-1A0A087WT03 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV26-1A0A087WT03 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 UNC93B3-201ENST00000308076 687 ntBASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 DUX4L4-201ENST00000566884 1269 ntBASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV26-1A0A087WT03 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 MTURN-203ENST00000409688 843 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV26-1A0A087WT03 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms