Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 AC010182.1-201ENST00000548943 2434 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 VENTXP1-201ENST00000569334 2716 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 FAM25E-201ENST00000411791 322 ntTSL 3 BASIC13.35□□□□□ -0.27
MTHFRP42898 AC096677.3-201ENST00000413162 387 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 HLA-U-204ENST00000418981 186 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 PFN1P3-201ENST00000443612 402 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 PFN1P4-201ENST00000450970 402 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 UCMA-202ENST00000463405 763 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC13.35□□□□□ -0.27
MTHFRP42898 TSACC-206ENST00000466306 477 ntTSL 3 BASIC13.35□□□□□ -0.27
MTHFRP42898 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 PTS-204ENST00000525803 625 ntTSL 3 BASIC13.35□□□□□ -0.27
MTHFRP42898 AP001922.6-201ENST00000532553 546 ntTSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 AC027277.1-201ENST00000535363 533 ntTSL 3 BASIC13.35□□□□□ -0.27
MTHFRP42898 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 AC005154.1-227ENST00000579174 755 ntTSL 3 BASIC13.35□□□□□ -0.27
MTHFRP42898 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC13.35□□□□□ -0.27
MTHFRP42898 AC012313.9-201ENST00000619318 633 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 AP003969.2-201ENST00000623739 2275 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 OSER1-AS1-202ENST00000437730 1563 ntTSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MTHFRP42898 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 DTX2P1-201ENST00000425797 1633 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 GDA-203ENST00000376986 1771 ntTSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 GHET1-201ENST00000627071 1906 ntBASIC13.35□□□□□ -0.27
MTHFRP42898 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.35□□□□□ -0.27
MTHFRP42898 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MTHFRP42898 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 APTX-203ENST00000379813 1121 ntTSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 C1QTNF9B-201ENST00000382137 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 IQCF6-201ENST00000398780 446 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
MTHFRP42898 AC007322.2-201ENST00000414540 605 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 SKA1-203ENST00000417656 1095 ntTSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 LINC00618-201ENST00000435624 700 ntTSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 AC007690.1-201ENST00000451924 468 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 SNHG14-207ENST00000452731 1064 ntTSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 AC022483.2-201ENST00000461464 555 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 AC113340.1-201ENST00000475257 636 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 APTX-220ENST00000476858 1068 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 AC022121.1-201ENST00000484584 579 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 MPI-212ENST00000565576 1148 ntTSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 AP000892.2-201ENST00000613535 324 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 AL109618.3-201ENST00000622748 430 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 HIST1H2APS4-202ENST00000635537 681 ntBASIC13.34□□□□□ -0.27
MTHFRP42898 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC13.34□□□□□ -0.27
MTHFRP42898 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC13.34□□□□□ -0.27
MTHFRP42898 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MTHFRP42898 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms