Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 FAM90A27P-201ENST00000593323 1370 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 FAM90A28P-202ENST00000597191 1374 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 M1AP-201ENST00000290536 2543 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 NEK11-213ENST00000511262 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 AC245297.1-201ENST00000313342 933 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 FATE1-201ENST00000370350 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 AC253536.2-201ENST00000423307 254 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 GAPDHP65-201ENST00000425487 1006 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 APRT-202ENST00000426324 664 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 AC010240.1-201ENST00000429606 459 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 AC009517.1-201ENST00000454750 570 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 C5orf38-203ENST00000457752 387 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC13.37□□□□□ -0.27
MTHFRP42898 AC007731.1-203ENST00000583722 474 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 AL512631.1-201ENST00000604086 840 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 AL133551.1-201ENST00000610279 1222 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 FAM230A-201ENST00000615181 315 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 AC130469.2-201ENST00000625112 1092 ntBASIC13.37□□□□□ -0.27
MTHFRP42898 UBR1-212ENST00000627960 189 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 NFKBIA-208ENST00000557140 1400 ntTSL 5 BASIC13.37□□□□□ -0.27
MTHFRP42898 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 DNPEP-220ENST00000523282 1662 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MTHFRP42898 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC13.37□□□□□ -0.27
MTHFRP42898 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.36□□□□□ -0.27
MTHFRP42898 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 OR8B8-201ENST00000328064 1033 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
MTHFRP42898 CDA-201ENST00000375071 963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 IFITM2-202ENST00000399817 659 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 RRM2P2-201ENST00000436212 652 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 IQCF5-201ENST00000446461 512 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
MTHFRP42898 GAPDHP76-201ENST00000512278 976 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MTHFRP42898 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC13.36□□□□□ -0.27
MTHFRP42898 AL137028.1-201ENST00000620521 555 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 AL513478.3-201ENST00000641038 1095 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC13.36□□□□□ -0.27
MTHFRP42898 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 AC102953.2-201ENST00000609755 3026 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 ACRBP-202ENST00000414226 1700 ntTSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 CES1P1-201ENST00000421606 1704 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 GPHN-202ENST00000459628 1723 ntTSL 2 BASIC13.36□□□□□ -0.27
MTHFRP42898 MSNP1-201ENST00000511640 1732 ntBASIC13.36□□□□□ -0.27
MTHFRP42898 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MTHFRP42898 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms