Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 HYDIN-209ENST00000538248 3152 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
RAB40CQ96S21 LLGL2-205ENST00000577200 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RAB40CQ96S21 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AC008663.2-201ENST00000517299 1777 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 RNF13-203ENST00000392894 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ASAH1-202ENST00000314146 1690 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 HLA-DQB1-202ENST00000399079 1501 ntBASIC10.44□□□□□ -0.74
RAB40CQ96S21 TIAM2-212ENST00000529824 5262 ntTSL 5 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AC093583.1-201ENST00000462083 2383 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 C17orf80-201ENST00000255557 2163 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 APOL3-201ENST00000349314 2117 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AL121574.1-201ENST00000415890 419 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AL133466.1-201ENST00000447582 150 ntBASIC10.44□□□□□ -0.74
RAB40CQ96S21 AQP7-207ENST00000447660 998 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 OR5BD1P-201ENST00000532527 817 ntBASIC10.44□□□□□ -0.74
RAB40CQ96S21 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AC026803.1-201ENST00000569130 274 ntBASIC10.44□□□□□ -0.74
RAB40CQ96S21 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 FN1-212ENST00000446046 7952 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ASPH-205ENST00000445642 3717 ntTSL 2 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 MIPEPP1-201ENST00000413533 2027 ntBASIC10.44□□□□□ -0.74
RAB40CQ96S21 CTCFL-211ENST00000502686 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 SLC16A7-203ENST00000547379 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 AC010182.1-201ENST00000548943 2434 ntBASIC10.44□□□□□ -0.74
RAB40CQ96S21 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC10.44□□□□□ -0.74
RAB40CQ96S21 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RAB40CQ96S21 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 SLC25A25-203ENST00000373068 3431 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 TMCC2-208ENST00000545499 3339 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC126323.1-203ENST00000562306 2579 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 ZP1-201ENST00000278853 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 UEVLD-213ENST00000543987 2503 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 PLA2G6-203ENST00000402064 3011 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 MMP2-202ENST00000437642 2469 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 TAF5L-203ENST00000366675 4062 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 WDR70-201ENST00000265107 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 TRAF3-201ENST00000347662 7700 ntTSL 5 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 TP53TG3F-201ENST00000617705 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC007274.2-201ENST00000421675 662 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 PDIA3P2-201ENST00000428073 158 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC104212.2-201ENST00000478813 628 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 HINT1-205ENST00000508488 703 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC011603.2-201ENST00000548149 675 ntTSL 3 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC020922.3-201ENST00000595064 547 ntBASIC10.43□□□□□ -0.74
RAB40CQ96S21 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms