Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
P04436 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
P04436 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 GPM6B-203ENST00000356942 1830 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
P04436 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 AL807752.1-201ENST00000395082 1322 ntBASIC11.73□□□□□ -0.53
P04436 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04436 FAM90A22P-201ENST00000400142 1395 ntBASIC11.73□□□□□ -0.53
P04436 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 THEMIS3P-201ENST00000416112 1586 ntBASIC11.73□□□□□ -0.53
P04436 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 AC099344.2-201ENST00000430897 1061 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 AC140481.1-202ENST00000436488 525 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 SCHIP1-201ENST00000445224 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 RN7SL452P-201ENST00000482923 291 ntBASIC11.73□□□□□ -0.53
P04436 CMC2-202ENST00000486645 766 ntTSL 3 BASIC11.73□□□□□ -0.53
P04436 AC026412.1-206ENST00000502273 206 ntBASIC11.73□□□□□ -0.53
P04436 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 HNRNPA1P7-201ENST00000521273 963 ntBASIC11.73□□□□□ -0.53
P04436 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC11.73□□□□□ -0.53
P04436 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04436 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC11.73□□□□□ -0.53
P04436 PEBP1P1-201ENST00000554856 510 ntBASIC11.73□□□□□ -0.53
P04436 CCDC32-214ENST00000561011 1577 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC11.73□□□□□ -0.53
P04436 AC092327.1-201ENST00000596612 744 ntBASIC11.73□□□□□ -0.53
P04436 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04436 AC087893.1-201ENST00000612818 664 ntBASIC11.73□□□□□ -0.53
P04436 AC023830.3-201ENST00000612995 1455 ntBASIC11.73□□□□□ -0.53
P04436 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC11.73□□□□□ -0.53
P04436 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 AC133919.3-201ENST00000621407 1804 ntBASIC11.73□□□□□ -0.53
P04436 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC11.73□□□□□ -0.53
P04436 AC091181.1-201ENST00000623762 2098 ntBASIC11.73□□□□□ -0.53
P04436 AL133464.1-205ENST00000634595 1535 ntTSL 5 BASIC11.73□□□□□ -0.53
P04436 SERPINA1-220ENST00000636712 1485 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
P04436 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.73□□□□□ -0.53
P04436 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
P04436 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
P04436 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC11.73□□□□□ -0.53
P04436 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 OTOF-203ENST00000339598 4756 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
P04436 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
P04436 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
P04436 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC11.72□□□□□ -0.53
P04436 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC11.72□□□□□ -0.53
P04436 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
P04436 AL008638.4-201ENST00000624792 1315 ntBASIC11.72□□□□□ -0.53
P04436 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
P04436 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC11.72□□□□□ -0.53
P04436 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 AC008267.3-201ENST00000448776 712 ntBASIC11.72□□□□□ -0.53
P04436 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
P04436 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC11.72□□□□□ -0.53
P04436 CDK2AP1-204ENST00000538446 1161 ntTSL 5 BASIC11.72□□□□□ -0.53
P04436 AP000753.1-201ENST00000542805 573 ntTSL 4 BASIC11.72□□□□□ -0.53
P04436 AC104759.1-201ENST00000559109 939 ntBASIC11.72□□□□□ -0.53
P04436 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
P04436 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
P04436 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
P04436 AC099786.2-201ENST00000427892 2203 ntTSL 2 BASIC11.72□□□□□ -0.53
P04436 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms