Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC13.7□□□□□ -0.22
O00370 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
O00370 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
O00370 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
O00370 CTAGE7P-201ENST00000435712 2436 ntBASIC13.7□□□□□ -0.22
O00370 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.7□□□□□ -0.22
O00370 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
O00370 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
O00370 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
O00370 SNX1-211ENST00000560829 1869 ntTSL 5 BASIC13.7□□□□□ -0.22
O00370 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
O00370 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC13.69□□□□□ -0.22
O00370 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC13.69□□□□□ -0.22
O00370 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.69□□□□□ -0.22
O00370 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 PHKB-208ENST00000566044 3829 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
O00370 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.69□□□□□ -0.22
O00370 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
O00370 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC13.69□□□□□ -0.22
O00370 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
O00370 RBP4-203ENST00000371469 814 ntTSL 5 BASIC13.69□□□□□ -0.22
O00370 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 AP000346.2-202ENST00000425948 383 ntBASIC13.69□□□□□ -0.22
O00370 AC098934.2-202ENST00000438944 1033 ntBASIC13.69□□□□□ -0.22
O00370 AC104435.2-201ENST00000478745 866 ntTSL 3 BASIC13.69□□□□□ -0.22
O00370 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 AC073610.2-201ENST00000537495 406 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
O00370 ANKRD26P1-203ENST00000569528 966 ntBASIC13.69□□□□□ -0.22
O00370 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC13.69□□□□□ -0.22
O00370 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC13.69□□□□□ -0.22
O00370 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC13.69□□□□□ -0.22
O00370 PRMT1P1-201ENST00000604252 1009 ntBASIC13.69□□□□□ -0.22
O00370 AC007450.4-201ENST00000614709 524 ntBASIC13.69□□□□□ -0.22
O00370 AC020904.3-201ENST00000624199 442 ntBASIC13.69□□□□□ -0.22
O00370 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.69□□□□□ -0.22
O00370 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.69□□□□□ -0.22
O00370 REXO1L1P-201ENST00000379010 6598 ntBASIC13.69□□□□□ -0.22
O00370 FAM95B1-211ENST00000592053 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC13.69□□□□□ -0.22
O00370 AL669942.1-203ENST00000610972 1541 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC13.69□□□□□ -0.22
O00370 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
O00370 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
O00370 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
O00370 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC13.68□□□□□ -0.22
O00370 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
O00370 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 NBPF13P-201ENST00000444082 1783 ntBASIC13.68□□□□□ -0.22
O00370 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
O00370 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 AC010536.1-201ENST00000538868 2611 ntBASIC13.68□□□□□ -0.22
O00370 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 DZIP1L-201ENST00000327532 3493 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
O00370 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
O00370 NKIRAS2-205ENST00000393881 1598 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
O00370 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
O00370 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC13.68□□□□□ -0.22
O00370 INMT-202ENST00000409539 803 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC13.68□□□□□ -0.22
O00370 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC13.68□□□□□ -0.22
O00370 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 RBMXP2-201ENST00000434705 1168 ntBASIC13.68□□□□□ -0.22
O00370 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.68□□□□□ -0.22
O00370 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
O00370 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.68□□□□□ -0.22
O00370 UBTFL5-201ENST00000443682 1191 ntBASIC13.68□□□□□ -0.22
O00370 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC13.68□□□□□ -0.22
O00370 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.68□□□□□ -0.22
O00370 AC080023.2-201ENST00000532615 208 ntBASIC13.68□□□□□ -0.22
O00370 AC004801.1-201ENST00000549557 360 ntBASIC13.68□□□□□ -0.22
O00370 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC13.68□□□□□ -0.22
O00370 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC13.68□□□□□ -0.22
O00370 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC13.68□□□□□ -0.22
O00370 AC006986.1-201ENST00000612764 241 ntBASIC13.68□□□□□ -0.22
O00370 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms