Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.76□□□□□ -0.21
O00370 IYD-208ENST00000500320 2158 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
O00370 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
O00370 WTAPP1-202ENST00000525739 2642 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.76□□□□□ -0.21
O00370 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC13.75□□□□□ -0.21
O00370 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 IP6K1-201ENST00000321599 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 AP003108.3-201ENST00000623765 2234 ntBASIC13.75□□□□□ -0.21
O00370 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
O00370 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.75□□□□□ -0.21
O00370 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
O00370 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
O00370 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 SLC25A6P1-201ENST00000412123 775 ntBASIC13.75□□□□□ -0.21
O00370 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 KRT18P39-201ENST00000415349 1299 ntBASIC13.75□□□□□ -0.21
O00370 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
O00370 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 PSME2P2-201ENST00000453033 700 ntBASIC13.75□□□□□ -0.21
O00370 AC083801.1-201ENST00000491689 358 ntBASIC13.75□□□□□ -0.21
O00370 RPSAP70-201ENST00000504462 864 ntBASIC13.75□□□□□ -0.21
O00370 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC13.75□□□□□ -0.21
O00370 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC13.75□□□□□ -0.21
O00370 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC13.75□□□□□ -0.21
O00370 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
O00370 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC13.75□□□□□ -0.21
O00370 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 AC092535.4-201ENST00000609548 397 ntBASIC13.75□□□□□ -0.21
O00370 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
O00370 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
O00370 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
O00370 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
O00370 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.75□□□□□ -0.21
O00370 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC13.75□□□□□ -0.21
O00370 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
O00370 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
O00370 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.74□□□□□ -0.21
O00370 HLF-202ENST00000430986 1385 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
O00370 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
O00370 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
O00370 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 LSM8-201ENST00000249299 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC13.74□□□□□ -0.21
O00370 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
O00370 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC13.74□□□□□ -0.21
O00370 MUC20-205ENST00000447234 2589 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
O00370 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC13.74□□□□□ -0.21
O00370 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
O00370 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.74□□□□□ -0.21
O00370 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC13.74□□□□□ -0.21
O00370 TULP3P1-202ENST00000453253 1291 ntBASIC13.74□□□□□ -0.21
O00370 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 AC009312.1-201ENST00000457110 592 ntTSL 4 BASIC13.74□□□□□ -0.21
O00370 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
O00370 AC093700.1-201ENST00000503348 717 ntBASIC13.74□□□□□ -0.21
O00370 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.74□□□□□ -0.21
O00370 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms