Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHGA4Q9Y5G9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 FP325331.1-202ENST00000623531 1380 ntBASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDHGA4Q9Y5G9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 AC136469.2-201ENST00000623944 1028 ntBASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDHGA4Q9Y5G9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDHGA4Q9Y5G9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 AC090192.1-201ENST00000517740 490 ntBASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 AC241377.3-202ENST00000626088 1088 ntBASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 AC241585.3-202ENST00000628937 1088 ntBASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 AC245100.8-202ENST00000629247 1058 ntBASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 LINC01529-204ENST00000636474 1715 ntBASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.4■■□□□ 1.02
PCDHGA4Q9Y5G9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA4Q9Y5G9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA4Q9Y5G9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA4Q9Y5G9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PCDHGA4Q9Y5G9 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PCDHGA4Q9Y5G9 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.39■■□□□ 1.02
PCDHGA4Q9Y5G9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 RARRES2P11-201ENST00000635158 484 ntBASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
PCDHGA4Q9Y5G9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 AL353803.4-201ENST00000565882 1934 ntBASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 DUX4L4-201ENST00000566884 1269 ntBASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 AC233992.3-201ENST00000607491 485 ntBASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PCDHGA4Q9Y5G9 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms