Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC068473.5-201ENST00000616428 2072 ntBASIC22.15■■□□□ 1.14
PCDHGC4Q9Y5F7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC4Q9Y5F7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGC4Q9Y5F7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
PCDHGC4Q9Y5F7 AL031602.1-201ENST00000633169 911 ntBASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGC4Q9Y5F7 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 MPST-208ENST00000628507 698 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGC4Q9Y5F7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGC4Q9Y5F7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 AP005435.1-201ENST00000529293 1178 ntBASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 AC087742.1-201ENST00000575880 1738 ntBASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
PCDHGC4Q9Y5F7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGC4Q9Y5F7 AC133561.1-201ENST00000568600 2415 ntBASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PCDHGC4Q9Y5F7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 TSPY26P-201ENST00000476365 1326 ntBASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 AC105265.2-201ENST00000467189 838 ntBASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 AC068587.7-201ENST00000641602 218 ntBASIC22.08■■□□□ 1.13
PCDHGC4Q9Y5F7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
PCDHGC4Q9Y5F7 AC019069.1-201ENST00000610008 1333 ntBASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 IGHV3-19-201ENST00000521488 291 ntBASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGC4Q9Y5F7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGC4Q9Y5F7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms