Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 AC008764.7-201ENST00000593779 1081 ntBASIC18.82■□□□□ 0.6
TREM2Q9NZC2 AC011298.3-201ENST00000615796 283 ntBASIC18.82■□□□□ 0.6
TREM2Q9NZC2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.82■□□□□ 0.6
TREM2Q9NZC2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 FP325331.1-202ENST00000623531 1380 ntBASIC18.81■□□□□ 0.6
TREM2Q9NZC2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 AL138724.1-201ENST00000606771 1088 ntBASIC18.81■□□□□ 0.6
TREM2Q9NZC2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TREM2Q9NZC2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 AL117328.2-201ENST00000624617 1940 ntBASIC18.8■□□□□ 0.6
TREM2Q9NZC2 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.8■□□□□ 0.6
TREM2Q9NZC2 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 AC133637.1-201ENST00000624115 1537 ntBASIC18.79■□□□□ 0.6
TREM2Q9NZC2 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 AC091305.1-201ENST00000479476 895 ntBASIC18.79■□□□□ 0.6
TREM2Q9NZC2 DUX4L4-201ENST00000566884 1269 ntBASIC18.79■□□□□ 0.6
TREM2Q9NZC2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 AC136469.2-201ENST00000623944 1028 ntBASIC18.79■□□□□ 0.6
TREM2Q9NZC2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TREM2Q9NZC2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TREM2Q9NZC2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 AC233723.2-201ENST00000623798 2106 ntBASIC18.77■□□□□ 0.6
TREM2Q9NZC2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 CA15P2-201ENST00000611168 834 ntBASIC18.77■□□□□ 0.6
TREM2Q9NZC2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TREM2Q9NZC2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TREM2Q9NZC2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TREM2Q9NZC2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms