Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PARPBPQ9NWS1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.54■□□□□ 0.72
PARPBPQ9NWS1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.54■□□□□ 0.72
PARPBPQ9NWS1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 PKD1P6-201ENST00000343738 4769 ntBASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 AC027682.1-201ENST00000562846 899 ntBASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.53■□□□□ 0.72
PARPBPQ9NWS1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 AC142381.2-201ENST00000566120 298 ntBASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 AC008764.7-201ENST00000593779 1081 ntBASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 CLDN5-201ENST00000403084 2357 ntBASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PARPBPQ9NWS1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PARPBPQ9NWS1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PARPBPQ9NWS1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PARPBPQ9NWS1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PARPBPQ9NWS1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.51■□□□□ 0.71
PARPBPQ9NWS1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 RASA4CP-201ENST00000424092 1398 ntBASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 AC091305.1-201ENST00000479476 895 ntBASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 SUDS3P1-201ENST00000505831 966 ntBASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PARPBPQ9NWS1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 AP005435.1-201ENST00000529293 1178 ntBASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 AL136967.2-201ENST00000623968 743 ntBASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PARPBPQ9NWS1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 MIR939-201ENST00000401314 82 ntBASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 AP001330.3-201ENST00000520123 633 ntBASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 AF213884.3-201ENST00000563833 479 ntBASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 AC126544.1-201ENST00000580842 1059 ntBASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 AL031432.3-201ENST00000607698 485 ntBASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PARPBPQ9NWS1 AC087239.1-201ENST00000622671 572 ntBASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms