Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PCDH18Q9HCL0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH18Q9HCL0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH18Q9HCL0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH18Q9HCL0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PCDH18Q9HCL0 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
PCDH18Q9HCL0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 CA15P2-201ENST00000611168 834 ntBASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 SYT6-210ENST00000641643 1587 ntBASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 AC137767.1-201ENST00000602918 1920 ntBASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDH18Q9HCL0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 AL031602.1-201ENST00000633169 911 ntBASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 CLDN5-201ENST00000403084 2357 ntBASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
PCDH18Q9HCL0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 DUX4L19-201ENST00000557448 1267 ntBASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDH18Q9HCL0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 OR2I1P-207ENST00000453522 948 ntBASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 AL138724.1-201ENST00000606771 1088 ntBASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.67■■□□□ 1.22
PCDH18Q9HCL0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
PCDH18Q9HCL0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms