Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BRF2Q9HAW0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 LINC00565-201ENST00000562710 2331 ntBASIC20.96■□□□□ 0.95
BRF2Q9HAW0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BRF2Q9HAW0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
BRF2Q9HAW0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
BRF2Q9HAW0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 C11orf96-202ENST00000528572 1834 ntBASIC20.95■□□□□ 0.94
BRF2Q9HAW0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 MIR3181-201ENST00000578512 73 ntBASIC20.95■□□□□ 0.94
BRF2Q9HAW0 AL031602.1-201ENST00000633169 911 ntBASIC20.95■□□□□ 0.94
BRF2Q9HAW0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.95■□□□□ 0.94
BRF2Q9HAW0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BRF2Q9HAW0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BRF2Q9HAW0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.92■□□□□ 0.94
BRF2Q9HAW0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.91■□□□□ 0.94
BRF2Q9HAW0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms