Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PIF1Q9H611 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.84■□□□□ 0.93
PIF1Q9H611 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.84■□□□□ 0.93
PIF1Q9H611 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PIF1Q9H611 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.83■□□□□ 0.93
PIF1Q9H611 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
PIF1Q9H611 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.83■□□□□ 0.93
PIF1Q9H611 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
PIF1Q9H611 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PIF1Q9H611 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PIF1Q9H611 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PIF1Q9H611 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PIF1Q9H611 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PIF1Q9H611 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
PIF1Q9H611 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PIF1Q9H611 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PIF1Q9H611 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PIF1Q9H611 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.83■□□□□ 0.92
PIF1Q9H611 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PIF1Q9H611 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PIF1Q9H611 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.82■□□□□ 0.92
PIF1Q9H611 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PIF1Q9H611 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PIF1Q9H611 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.82■□□□□ 0.92
PIF1Q9H611 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.82■□□□□ 0.92
PIF1Q9H611 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PIF1Q9H611 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.81■□□□□ 0.92
PIF1Q9H611 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.81■□□□□ 0.92
PIF1Q9H611 AC026310.3-201ENST00000625186 2373 ntBASIC20.81■□□□□ 0.92
PIF1Q9H611 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.81■□□□□ 0.92
PIF1Q9H611 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PIF1Q9H611 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
PIF1Q9H611 SNX5-217ENST00000606557 1087 ntBASIC20.81■□□□□ 0.92
PIF1Q9H611 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.81■□□□□ 0.92
PIF1Q9H611 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.81■□□□□ 0.92
PIF1Q9H611 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.81■□□□□ 0.92
PIF1Q9H611 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PIF1Q9H611 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PIF1Q9H611 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.81■□□□□ 0.92
PIF1Q9H611 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PIF1Q9H611 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.8■□□□□ 0.92
PIF1Q9H611 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PIF1Q9H611 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PIF1Q9H611 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PIF1Q9H611 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.8■□□□□ 0.92
PIF1Q9H611 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.8■□□□□ 0.92
PIF1Q9H611 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PIF1Q9H611 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PIF1Q9H611 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.8■□□□□ 0.92
PIF1Q9H611 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PIF1Q9H611 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PIF1Q9H611 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PIF1Q9H611 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PIF1Q9H611 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PIF1Q9H611 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 FAM99A-202ENST00000538190 1989 ntBASIC20.79■□□□□ 0.92
PIF1Q9H611 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PIF1Q9H611 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PIF1Q9H611 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PIF1Q9H611 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.79■□□□□ 0.92
PIF1Q9H611 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PIF1Q9H611 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.78■□□□□ 0.92
PIF1Q9H611 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.78■□□□□ 0.92
PIF1Q9H611 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PIF1Q9H611 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.78■□□□□ 0.92
PIF1Q9H611 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PIF1Q9H611 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PIF1Q9H611 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PIF1Q9H611 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIF1Q9H611 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.77■□□□□ 0.92
PIF1Q9H611 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PIF1Q9H611 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
PIF1Q9H611 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PIF1Q9H611 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.77■□□□□ 0.92
PIF1Q9H611 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms