Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.96■□□□□ 0.15
MAP1LC3AQ9H492 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MAP1LC3AQ9H492 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
MAP1LC3AQ9H492 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
MAP1LC3AQ9H492 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MAP1LC3AQ9H492 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MAP1LC3AQ9H492 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
MAP1LC3AQ9H492 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
MAP1LC3AQ9H492 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 AC005229.4-201ENST00000610085 2198 ntBASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 AL592295.1-201ENST00000400984 884 ntBASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MAP1LC3AQ9H492 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 AL353803.4-201ENST00000565882 1934 ntBASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
MAP1LC3AQ9H492 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 GFER-205ENST00000569451 517 ntTSL 5 BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 AC087742.1-201ENST00000575880 1738 ntBASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MAP1LC3AQ9H492 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 AC026202.3-201ENST00000600805 1127 ntBASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 AC007029.1-201ENST00000604183 313 ntBASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 RAP2CP1-202ENST00000605179 643 ntBASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
MAP1LC3AQ9H492 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 AC131274.2-201ENST00000580697 1507 ntBASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 AC092667.1-201ENST00000434301 2586 ntBASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
MAP1LC3AQ9H492 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MAP1LC3AQ9H492 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
MAP1LC3AQ9H492 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
MAP1LC3AQ9H492 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MAP1LC3AQ9H492 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
MAP1LC3AQ9H492 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms