Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CDC42EP4Q9H3Q1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 AC009086.3-201ENST00000623486 1008 ntBASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CDC42EP4Q9H3Q1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 MIR4508-201ENST00000584178 70 ntBASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
CDC42EP4Q9H3Q1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
CDC42EP4Q9H3Q1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.27■■□□□ 1.15
CDC42EP4Q9H3Q1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
CDC42EP4Q9H3Q1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 DUX4L4-201ENST00000566884 1269 ntBASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 AC244015.2-201ENST00000616358 1861 ntBASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CDC42EP4Q9H3Q1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 SLC25A24-204ENST00000569674 2357 ntBASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CDC42EP4Q9H3Q1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 AC005703.6-201ENST00000623265 1329 ntBASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 PKD1P6-201ENST00000343738 4769 ntBASIC22.23■■□□□ 1.15
CDC42EP4Q9H3Q1 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CDC42EP4Q9H3Q1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms