Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 pRNA.6-201ENST00000610482 90 ntBASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 pRNA.5-201ENST00000612139 90 ntBASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 pRNA.11-201ENST00000618423 90 ntBASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 pRNA.13-201ENST00000619112 90 ntBASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CXXC4Q9H2H0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CXXC4Q9H2H0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXXC4Q9H2H0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXXC4Q9H2H0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CXXC4Q9H2H0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.08■□□□□ 0.65
CXXC4Q9H2H0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 CDCA4P2-201ENST00000441182 718 ntBASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 AC104771.1-201ENST00000603335 964 ntBASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CXXC4Q9H2H0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 AC144652.1-201ENST00000609974 1624 ntBASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CXXC4Q9H2H0 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 AC073111.5-205ENST00000641717 521 ntBASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 FP325331.1-202ENST00000623531 1380 ntBASIC19.06■□□□□ 0.64
CXXC4Q9H2H0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CXXC4Q9H2H0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CXXC4Q9H2H0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms