Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 AC244015.2-201ENST00000616358 1861 ntBASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-1Q9BYR8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 NIFKP4-201ENST00000567275 1192 ntBASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 HSD17B1P1-201ENST00000590052 955 ntBASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-1Q9BYR8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 AC004987.1-201ENST00000428627 508 ntBASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 AC010980.1-201ENST00000587192 1142 ntBASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 BHLHE23-202ENST00000612929 1109 ntBASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KRTAP3-1Q9BYR8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 GOLGA2P6-201ENST00000340929 2049 ntBASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 CA15P2-201ENST00000611168 834 ntBASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 AC074183.2-201ENST00000623112 922 ntBASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC11.09□□□□□ -0.63
KRTAP3-1Q9BYR8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC11.08□□□□□ -0.63
KRTAP3-1Q9BYR8 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 AF106564.1-201ENST00000607058 2553 ntBASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC11.08□□□□□ -0.64
KRTAP3-1Q9BYR8 ATP5G2P3-201ENST00000429083 425 ntBASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms