Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.64■□□□□ 0.73
CDCA4Q9BXL8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 LINC01960-201ENST00000563759 1884 ntBASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 AC022616.5-201ENST00000518796 181 ntBASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CDCA4Q9BXL8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 KRT18P60-201ENST00000312876 1297 ntBASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 DUX4L9-201ENST00000449051 1259 ntBASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CDCA4Q9BXL8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 AF131216.4-201ENST00000638924 1588 ntBASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CDCA4Q9BXL8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.6■□□□□ 0.73
CDCA4Q9BXL8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 Z98882.1-201ENST00000622160 2253 ntBASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 LINC01521-201ENST00000504184 1943 ntBASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
CDCA4Q9BXL8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.58■□□□□ 0.73
CDCA4Q9BXL8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CDCA4Q9BXL8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.58■□□□□ 0.73
CDCA4Q9BXL8 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CDCA4Q9BXL8 TSPY13P-201ENST00000338964 914 ntBASIC19.58■□□□□ 0.72
CDCA4Q9BXL8 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA4Q9BXL8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA4Q9BXL8 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CDCA4Q9BXL8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 LINC01529-204ENST00000636474 1715 ntBASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDCA4Q9BXL8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms