Protein–RNA interactions for Protein: Q9BSG5

RTBDN, Retbindin, humanhuman

Predicted RBP Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTBDNQ9BSG5 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.16■□□□□ 0.5
RTBDNQ9BSG5 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTBDNQ9BSG5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RTBDNQ9BSG5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTBDNQ9BSG5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RTBDNQ9BSG5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 LINC01529-204ENST00000636474 1715 ntBASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RTBDNQ9BSG5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.14■□□□□ 0.5
RTBDNQ9BSG5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTBDNQ9BSG5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 THA1P-201ENST00000590384 1145 ntBASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 U85056.1-201ENST00000616429 682 ntBASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTBDNQ9BSG5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 KRT18P24-201ENST00000344739 1156 ntBASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.12■□□□□ 0.49
RTBDNQ9BSG5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 FP325331.1-202ENST00000623531 1380 ntBASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTBDNQ9BSG5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 Z98882.1-201ENST00000622160 2253 ntBASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RTBDNQ9BSG5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms