Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 MIR4466-201ENST00000606121 54 ntBASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 AC133637.1-201ENST00000624115 1537 ntBASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHB18PQ96TA0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 AC092053.2-201ENST00000640557 1818 ntBASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
PCDHB18PQ96TA0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 MIR3181-201ENST00000578512 73 ntBASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 CA15P2-201ENST00000611168 834 ntBASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB18PQ96TA0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHB18PQ96TA0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB18PQ96TA0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 SRD5A1P1-201ENST00000442297 786 ntBASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHB18PQ96TA0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 C11orf96-202ENST00000528572 1834 ntBASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHB18PQ96TA0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDHB18PQ96TA0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms