Protein–RNA interactions for Protein: Q96T76

MMS19, MMS19 nucleotide excision repair protein homolog, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMS19Q96T76 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
MMS19Q96T76 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
MMS19Q96T76 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.95■■□□□ 1.43
MMS19Q96T76 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.95■■□□□ 1.42
MMS19Q96T76 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
MMS19Q96T76 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
MMS19Q96T76 SERBP1P1-201ENST00000396021 1160 ntBASIC23.95■■□□□ 1.42
MMS19Q96T76 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
MMS19Q96T76 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
MMS19Q96T76 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.95■■□□□ 1.42
MMS19Q96T76 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
MMS19Q96T76 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
MMS19Q96T76 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.94■■□□□ 1.42
MMS19Q96T76 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.94■■□□□ 1.42
MMS19Q96T76 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.94■■□□□ 1.42
MMS19Q96T76 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
MMS19Q96T76 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.94■■□□□ 1.42
MMS19Q96T76 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
MMS19Q96T76 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.94■■□□□ 1.42
MMS19Q96T76 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
MMS19Q96T76 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
MMS19Q96T76 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
MMS19Q96T76 AC135279.3-201ENST00000610945 1311 ntBASIC23.93■■□□□ 1.42
MMS19Q96T76 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC23.93■■□□□ 1.42
MMS19Q96T76 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 MIR3181-201ENST00000578512 73 ntBASIC23.93■■□□□ 1.42
MMS19Q96T76 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.93■■□□□ 1.42
MMS19Q96T76 pRNA.6-201ENST00000610482 90 ntBASIC23.93■■□□□ 1.42
MMS19Q96T76 pRNA.5-201ENST00000612139 90 ntBASIC23.93■■□□□ 1.42
MMS19Q96T76 pRNA.11-201ENST00000618423 90 ntBASIC23.93■■□□□ 1.42
MMS19Q96T76 pRNA.13-201ENST00000619112 90 ntBASIC23.93■■□□□ 1.42
MMS19Q96T76 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.93■■□□□ 1.42
MMS19Q96T76 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
MMS19Q96T76 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
MMS19Q96T76 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMS19Q96T76 AL353803.4-201ENST00000565882 1934 ntBASIC23.92■■□□□ 1.42
MMS19Q96T76 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMS19Q96T76 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMS19Q96T76 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
MMS19Q96T76 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.92■■□□□ 1.42
MMS19Q96T76 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.92■■□□□ 1.42
MMS19Q96T76 AC024257.2-201ENST00000549699 147 ntBASIC23.92■■□□□ 1.42
MMS19Q96T76 DUX4L4-201ENST00000566884 1269 ntBASIC23.92■■□□□ 1.42
MMS19Q96T76 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC23.92■■□□□ 1.42
MMS19Q96T76 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.92■■□□□ 1.42
MMS19Q96T76 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
MMS19Q96T76 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.91■■□□□ 1.42
MMS19Q96T76 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.91■■□□□ 1.42
MMS19Q96T76 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.91■■□□□ 1.42
MMS19Q96T76 AC106739.1-201ENST00000617035 715 ntBASIC23.91■■□□□ 1.42
MMS19Q96T76 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.91■■□□□ 1.42
MMS19Q96T76 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.91■■□□□ 1.42
MMS19Q96T76 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
MMS19Q96T76 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
MMS19Q96T76 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.9■■□□□ 1.42
MMS19Q96T76 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
MMS19Q96T76 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMS19Q96T76 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMS19Q96T76 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
MMS19Q96T76 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MMS19Q96T76 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.9■■□□□ 1.42
MMS19Q96T76 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.9■■□□□ 1.42
MMS19Q96T76 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
MMS19Q96T76 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
MMS19Q96T76 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
MMS19Q96T76 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.9■■□□□ 1.42
MMS19Q96T76 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
MMS19Q96T76 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.89■■□□□ 1.42
MMS19Q96T76 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.42
MMS19Q96T76 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.89■■□□□ 1.42
MMS19Q96T76 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
MMS19Q96T76 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MMS19Q96T76 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.89■■□□□ 1.41
MMS19Q96T76 AL138724.1-201ENST00000606771 1088 ntBASIC23.89■■□□□ 1.41
MMS19Q96T76 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC23.89■■□□□ 1.41
MMS19Q96T76 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
MMS19Q96T76 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
MMS19Q96T76 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.89■■□□□ 1.41
MMS19Q96T76 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
MMS19Q96T76 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
MMS19Q96T76 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
MMS19Q96T76 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.88■■□□□ 1.41
MMS19Q96T76 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
MMS19Q96T76 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.88■■□□□ 1.41
MMS19Q96T76 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.88■■□□□ 1.41
MMS19Q96T76 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.88■■□□□ 1.41
MMS19Q96T76 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMS19Q96T76 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.87■■□□□ 1.41
MMS19Q96T76 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMS19Q96T76 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMS19Q96T76 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMS19Q96T76 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.87■■□□□ 1.41
MMS19Q96T76 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
MMS19Q96T76 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
MMS19Q96T76 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms