Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NR1H4Q96RI1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NR1H4Q96RI1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 AC087742.1-201ENST00000575880 1738 ntBASIC20.59■□□□□ 0.89
NR1H4Q96RI1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NR1H4Q96RI1 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
NR1H4Q96RI1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NR1H4Q96RI1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
NR1H4Q96RI1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.58■□□□□ 0.89
NR1H4Q96RI1 MIR3648-2-201ENST00000581792 180 ntBASIC20.58■□□□□ 0.89
NR1H4Q96RI1 MIR3648-1-201ENST00000615959 180 ntBASIC20.58■□□□□ 0.89
NR1H4Q96RI1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
NR1H4Q96RI1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NR1H4Q96RI1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 LINC01006-201ENST00000333319 2292 ntBASIC20.57■□□□□ 0.88
NR1H4Q96RI1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NR1H4Q96RI1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 METRNL-202ENST00000570778 967 ntTSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 AC016575.1-201ENST00000607026 382 ntBASIC20.56■□□□□ 0.88
NR1H4Q96RI1 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NR1H4Q96RI1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
NR1H4Q96RI1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NR1H4Q96RI1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms