Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 RPS2P7-201ENST00000447334 885 ntBASIC16.48■□□□□ 0.23
AP1S3Q96PC3 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
AP1S3Q96PC3 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
AP1S3Q96PC3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP1S3Q96PC3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP1S3Q96PC3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 AC018755.3-202ENST00000596210 929 ntBASIC16.45■□□□□ 0.22
AP1S3Q96PC3 AC009831.1-201ENST00000580420 1582 ntBASIC16.45■□□□□ 0.22
AP1S3Q96PC3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 GUSBP5-202ENST00000510805 1989 ntBASIC16.45■□□□□ 0.22
AP1S3Q96PC3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP1S3Q96PC3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 AC133552.2-201ENST00000619106 1032 ntBASIC16.44■□□□□ 0.22
AP1S3Q96PC3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP1S3Q96PC3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 GPX1-201ENST00000419349 1106 ntBASIC16.43■□□□□ 0.22
AP1S3Q96PC3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 AC127496.7-201ENST00000625110 1798 ntBASIC16.43■□□□□ 0.22
AP1S3Q96PC3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
AP1S3Q96PC3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms