Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.81■□□□□ 0.76
HPS1Q92902 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.81■□□□□ 0.76
HPS1Q92902 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HPS1Q92902 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HPS1Q92902 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS1Q92902 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS1Q92902 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS1Q92902 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.8■□□□□ 0.76
HPS1Q92902 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.8■□□□□ 0.76
HPS1Q92902 AC021242.3-201ENST00000607598 1377 ntBASIC19.8■□□□□ 0.76
HPS1Q92902 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HPS1Q92902 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS1Q92902 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 AC242852.2-201ENST00000615738 1807 ntBASIC19.79■□□□□ 0.76
HPS1Q92902 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.79■□□□□ 0.76
HPS1Q92902 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.79■□□□□ 0.76
HPS1Q92902 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HPS1Q92902 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HPS1Q92902 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
HPS1Q92902 AC019069.1-201ENST00000610008 1333 ntBASIC19.78■□□□□ 0.76
HPS1Q92902 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS1Q92902 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS1Q92902 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.78■□□□□ 0.76
HPS1Q92902 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 KRT16P3-201ENST00000439127 1283 ntBASIC19.78■□□□□ 0.76
HPS1Q92902 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.78■□□□□ 0.76
HPS1Q92902 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.78■□□□□ 0.76
HPS1Q92902 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HPS1Q92902 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS1Q92902 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS1Q92902 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.77■□□□□ 0.76
HPS1Q92902 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.77■□□□□ 0.76
HPS1Q92902 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS1Q92902 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.77■□□□□ 0.76
HPS1Q92902 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 AC008406.3-201ENST00000620001 1374 ntBASIC19.77■□□□□ 0.76
HPS1Q92902 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.77■□□□□ 0.76
HPS1Q92902 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
HPS1Q92902 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
HPS1Q92902 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HPS1Q92902 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HPS1Q92902 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HPS1Q92902 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HPS1Q92902 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.77■□□□□ 0.75
HPS1Q92902 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.76■□□□□ 0.75
HPS1Q92902 AC090877.2-201ENST00000558441 1738 ntBASIC19.76■□□□□ 0.75
HPS1Q92902 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HPS1Q92902 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
HPS1Q92902 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 UNC93B8-201ENST00000511903 705 ntBASIC19.76■□□□□ 0.75
HPS1Q92902 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HPS1Q92902 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HPS1Q92902 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms