Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 SYT6-210ENST00000641643 1587 ntBASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HMGCLL1Q8TB92 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 MIR3181-201ENST00000578512 73 ntBASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
HMGCLL1Q8TB92 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HMGCLL1Q8TB92 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 SERBP1P1-201ENST00000396021 1160 ntBASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 AC011298.3-201ENST00000615796 283 ntBASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HMGCLL1Q8TB92 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
HMGCLL1Q8TB92 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.52■■□□□ 1.03
HMGCLL1Q8TB92 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 pRNA.6-201ENST00000610482 90 ntBASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 pRNA.5-201ENST00000612139 90 ntBASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 pRNA.11-201ENST00000618423 90 ntBASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 pRNA.13-201ENST00000619112 90 ntBASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HMGCLL1Q8TB92 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 UNC93B3-201ENST00000308076 687 ntBASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HMGCLL1Q8TB92 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.49■■□□□ 1.03
HMGCLL1Q8TB92 AC096631.2-201ENST00000436136 790 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms