Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 BHLHE23-202ENST00000612929 1109 ntBASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RFWD2Q8NHY2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 ATP5G2P3-201ENST00000429083 425 ntBASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RFWD2Q8NHY2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.58■■□□□ 1.05
RFWD2Q8NHY2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RFWD2Q8NHY2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.58■■□□□ 1.04
RFWD2Q8NHY2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 AC012354.3-201ENST00000623734 483 ntBASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 AF131216.4-201ENST00000638924 1588 ntBASIC21.57■■□□□ 1.04
RFWD2Q8NHY2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 AC144652.1-201ENST00000609974 1624 ntBASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RFWD2Q8NHY2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 TSPY13P-201ENST00000338964 914 ntBASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.55■■□□□ 1.04
RFWD2Q8NHY2 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 AC004448.1-201ENST00000458332 883 ntBASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 AL033527.3-201ENST00000566366 1196 ntBASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
RFWD2Q8NHY2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RFWD2Q8NHY2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RFWD2Q8NHY2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms