Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 MTDHP2-201ENST00000601468 714 ntBASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMEM116Q8NCL8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 DUX4L4-201ENST00000566884 1269 ntBASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 AC009086.3-201ENST00000623486 1008 ntBASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.28■□□□□ 0.36
TMEM116Q8NCL8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 TSPY9P-201ENST00000440215 945 ntBASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 TSPY11P-201ENST00000442607 1045 ntBASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 AL035685.1-201ENST00000636663 812 ntBASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 AC080038.3-201ENST00000623346 1952 ntBASIC17.27■□□□□ 0.36
TMEM116Q8NCL8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM116Q8NCL8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 C11orf96-202ENST00000528572 1834 ntBASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM116Q8NCL8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 AC010997.5-201ENST00000609182 354 ntBASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM116Q8NCL8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.24■□□□□ 0.35
TMEM116Q8NCL8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms