Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
RAB42Q8N4Z0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
RAB42Q8N4Z0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.29■■□□□ 1
RAB42Q8N4Z0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RAB42Q8N4Z0 AC142381.2-201ENST00000566120 298 ntBASIC21.29■■□□□ 1
RAB42Q8N4Z0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB42Q8N4Z0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 AC091305.1-201ENST00000479476 895 ntBASIC21.28■■□□□ 1
RAB42Q8N4Z0 AP005435.1-201ENST00000529293 1178 ntBASIC21.28■■□□□ 1
RAB42Q8N4Z0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RAB42Q8N4Z0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB42Q8N4Z0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RAB42Q8N4Z0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RAB42Q8N4Z0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB42Q8N4Z0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB42Q8N4Z0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
RAB42Q8N4Z0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB42Q8N4Z0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB42Q8N4Z0 MIR638-201ENST00000385237 100 ntBASIC21.27■■□□□ 1
RAB42Q8N4Z0 AP001330.3-201ENST00000520123 633 ntBASIC21.27■■□□□ 1
RAB42Q8N4Z0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 AF213884.3-201ENST00000563833 479 ntBASIC21.27■■□□□ 1
RAB42Q8N4Z0 AC005837.3-201ENST00000612163 286 ntBASIC21.27■■□□□ 1
RAB42Q8N4Z0 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB42Q8N4Z0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RAB42Q8N4Z0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RAB42Q8N4Z0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RAB42Q8N4Z0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 RASA4CP-201ENST00000424092 1398 ntBASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 AC099791.1-201ENST00000416440 715 ntBASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 AC010525.1-201ENST00000585559 441 ntBASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB42Q8N4Z0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 ESRRAP2-201ENST00000418437 1549 ntBASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 MIR939-201ENST00000401314 82 ntBASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 AL031602.1-201ENST00000633169 911 ntBASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB42Q8N4Z0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB42Q8N4Z0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAB42Q8N4Z0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RAB42Q8N4Z0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RAB42Q8N4Z0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms