Protein–RNA interactions for Protein: Q8IWR1

TRIM59, Tripartite motif-containing protein 59, humanhuman

Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59Q8IWR1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM59Q8IWR1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.89■■□□□ 1.42
TRIM59Q8IWR1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM59Q8IWR1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRIM59Q8IWR1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 pRNA.6-201ENST00000610482 90 ntBASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 pRNA.5-201ENST00000612139 90 ntBASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 pRNA.11-201ENST00000618423 90 ntBASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 pRNA.13-201ENST00000619112 90 ntBASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 AC133637.1-201ENST00000624115 1537 ntBASIC23.89■■□□□ 1.41
TRIM59Q8IWR1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRIM59Q8IWR1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 C11orf96-202ENST00000528572 1834 ntBASIC23.87■■□□□ 1.41
TRIM59Q8IWR1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.86■■□□□ 1.41
TRIM59Q8IWR1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 MIR3181-201ENST00000578512 73 ntBASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 AL031602.1-201ENST00000633169 911 ntBASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRIM59Q8IWR1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM59Q8IWR1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM59Q8IWR1 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM59Q8IWR1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM59Q8IWR1 SRD5A1P1-201ENST00000442297 786 ntBASIC23.84■■□□□ 1.41
TRIM59Q8IWR1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TRIM59Q8IWR1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.83■■□□□ 1.41
TRIM59Q8IWR1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRIM59Q8IWR1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
TRIM59Q8IWR1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms