Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SFTPA1Q8IWL2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SFTPA1Q8IWL2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
SFTPA1Q8IWL2 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SFTPA1Q8IWL2 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
SFTPA1Q8IWL2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 AC010141.3-201ENST00000456659 717 ntBASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SFTPA1Q8IWL2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 AC006015.1-201ENST00000429970 570 ntBASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SFTPA1Q8IWL2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SFTPA1Q8IWL2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 ID1-201ENST00000376105 1233 ntBASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.29■■□□□ 1.16
SFTPA1Q8IWL2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 AC137761.2-201ENST00000561729 223 ntBASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 AC145350.3-201ENST00000569033 163 ntBASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.28■■□□□ 1.16
SFTPA1Q8IWL2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 AC080038.1-201ENST00000611274 1154 ntBASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 DUSP8P3-201ENST00000399571 1760 ntBASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.27■■□□□ 1.16
SFTPA1Q8IWL2 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
SFTPA1Q8IWL2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 RAP2CP1-201ENST00000605103 478 ntBASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 AC068587.7-201ENST00000641602 218 ntBASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 ANOS2P-203ENST00000472227 1816 ntBASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SFTPA1Q8IWL2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms