Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
APLFQ8IW19 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APLFQ8IW19 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APLFQ8IW19 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.52■■□□□ 1.04
APLFQ8IW19 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
APLFQ8IW19 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.52■■□□□ 1.04
APLFQ8IW19 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
APLFQ8IW19 AC004448.1-201ENST00000458332 883 ntBASIC21.52■■□□□ 1.04
APLFQ8IW19 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
APLFQ8IW19 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
APLFQ8IW19 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
APLFQ8IW19 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.51■■□□□ 1.03
APLFQ8IW19 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.51■■□□□ 1.03
APLFQ8IW19 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APLFQ8IW19 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
APLFQ8IW19 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.51■■□□□ 1.03
APLFQ8IW19 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
APLFQ8IW19 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.51■■□□□ 1.03
APLFQ8IW19 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.51■■□□□ 1.03
APLFQ8IW19 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
APLFQ8IW19 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APLFQ8IW19 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APLFQ8IW19 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.51■■□□□ 1.03
APLFQ8IW19 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.51■■□□□ 1.03
APLFQ8IW19 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APLFQ8IW19 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
APLFQ8IW19 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APLFQ8IW19 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APLFQ8IW19 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.5■■□□□ 1.03
APLFQ8IW19 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.5■■□□□ 1.03
APLFQ8IW19 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APLFQ8IW19 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APLFQ8IW19 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APLFQ8IW19 AC024257.2-201ENST00000549699 147 ntBASIC21.5■■□□□ 1.03
APLFQ8IW19 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APLFQ8IW19 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.5■■□□□ 1.03
APLFQ8IW19 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.5■■□□□ 1.03
APLFQ8IW19 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.5■■□□□ 1.03
APLFQ8IW19 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
APLFQ8IW19 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 DUX4L19-201ENST00000557448 1267 ntBASIC21.49■■□□□ 1.03
APLFQ8IW19 MIR6089-201ENST00000616698 64 ntBASIC21.49■■□□□ 1.03
APLFQ8IW19 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.49■■□□□ 1.03
APLFQ8IW19 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APLFQ8IW19 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
APLFQ8IW19 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
APLFQ8IW19 AC026271.2-201ENST00000428091 497 ntBASIC21.48■■□□□ 1.03
APLFQ8IW19 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.48■■□□□ 1.03
APLFQ8IW19 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.48■■□□□ 1.03
APLFQ8IW19 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
APLFQ8IW19 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.48■■□□□ 1.03
APLFQ8IW19 AC242852.2-201ENST00000615738 1807 ntBASIC21.48■■□□□ 1.03
APLFQ8IW19 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APLFQ8IW19 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.47■■□□□ 1.03
APLFQ8IW19 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.47■■□□□ 1.03
APLFQ8IW19 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.47■■□□□ 1.03
APLFQ8IW19 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.47■■□□□ 1.03
APLFQ8IW19 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
APLFQ8IW19 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
APLFQ8IW19 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
APLFQ8IW19 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.47■■□□□ 1.03
APLFQ8IW19 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.46■■□□□ 1.03
APLFQ8IW19 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
APLFQ8IW19 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.46■■□□□ 1.03
APLFQ8IW19 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.46■■□□□ 1.03
APLFQ8IW19 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.46■■□□□ 1.03
APLFQ8IW19 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
APLFQ8IW19 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
APLFQ8IW19 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
APLFQ8IW19 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.46■■□□□ 1.03
APLFQ8IW19 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.46■■□□□ 1.03
APLFQ8IW19 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.46■■□□□ 1.03
APLFQ8IW19 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms