Protein–RNA interactions for Protein: Q86UQ4

ABCA13, ATP-binding cassette sub-family A member 13, humanhuman

Predictions only

Length 5,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13Q86UQ4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 KRT87P-202ENST00000534226 1464 ntBASIC13.56□□□□□ -0.24
ABCA13Q86UQ4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 CD177P1-201ENST00000606252 935 ntBASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 C1QBPP2-201ENST00000528754 825 ntBASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
ABCA13Q86UQ4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 AP003097.1-201ENST00000530657 1135 ntBASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
ABCA13Q86UQ4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 TPM4P1-201ENST00000436100 807 ntBASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 AC141586.4-201ENST00000624558 1573 ntBASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 AC091874.3-201ENST00000512672 1195 ntBASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 ABCB10P1-201ENST00000614297 2181 ntBASIC13.53□□□□□ -0.24
ABCA13Q86UQ4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 RPPH1-201ENST00000516869 333 ntBASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
ABCA13Q86UQ4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 AP004609.3-201ENST00000610705 1884 ntBASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ABCA13Q86UQ4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms