Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFHX4Q86UP3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 KRT19P1-201ENST00000405746 1186 ntBASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 OR2I1P-207ENST00000453522 948 ntBASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.8■□□□□ 0.92
ZFHX4Q86UP3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 AC105233.4-201ENST00000642045 216 ntBASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZFHX4Q86UP3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZFHX4Q86UP3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.77■□□□□ 0.92
ZFHX4Q86UP3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZFHX4Q86UP3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZFHX4Q86UP3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZFHX4Q86UP3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.77■□□□□ 0.92
ZFHX4Q86UP3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZFHX4Q86UP3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ZFHX4Q86UP3 MIR6089-201ENST00000616698 64 ntBASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 BX005040.4-201ENST00000637145 1518 ntBASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 DUX4L4-201ENST00000566884 1269 ntBASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.76■□□□□ 0.91
ZFHX4Q86UP3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 AC141586.4-201ENST00000624558 1573 ntBASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZFHX4Q86UP3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.74■□□□□ 0.91
ZFHX4Q86UP3 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.73■□□□□ 0.91
ZFHX4Q86UP3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms