Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RSPH3Q86UC2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
RSPH3Q86UC2 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
RSPH3Q86UC2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RSPH3Q86UC2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RSPH3Q86UC2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC24.2■■□□□ 1.46
RSPH3Q86UC2 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RSPH3Q86UC2 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RSPH3Q86UC2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RSPH3Q86UC2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 ABCB10P4-201ENST00000566803 2184 ntBASIC24.19■■□□□ 1.46
RSPH3Q86UC2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.19■■□□□ 1.46
RSPH3Q86UC2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.18■■□□□ 1.46
RSPH3Q86UC2 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
RSPH3Q86UC2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.16■■□□□ 1.46
RSPH3Q86UC2 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RSPH3Q86UC2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 SMUG1P1-201ENST00000590640 811 ntBASIC24.15■■□□□ 1.46
RSPH3Q86UC2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.15■■□□□ 1.46
RSPH3Q86UC2 OXCT2P1-201ENST00000447263 1535 ntBASIC24.15■■□□□ 1.46
RSPH3Q86UC2 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.14■■□□□ 1.46
RSPH3Q86UC2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.14■■□□□ 1.46
RSPH3Q86UC2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.14■■□□□ 1.45
RSPH3Q86UC2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 AC016769.1-201ENST00000409132 1010 ntBASIC24.13■■□□□ 1.45
RSPH3Q86UC2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
RSPH3Q86UC2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
RSPH3Q86UC2 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.12■■□□□ 1.45
RSPH3Q86UC2 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.12■■□□□ 1.45
RSPH3Q86UC2 AC137761.2-201ENST00000561729 223 ntBASIC24.12■■□□□ 1.45
RSPH3Q86UC2 AC145350.3-201ENST00000569033 163 ntBASIC24.12■■□□□ 1.45
RSPH3Q86UC2 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RSPH3Q86UC2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.12■■□□□ 1.45
RSPH3Q86UC2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RSPH3Q86UC2 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms