Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAI1Q7Z5J4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.83■□□□□ 0.61
RAI1Q7Z5J4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC18.83■□□□□ 0.6
RAI1Q7Z5J4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 AC137761.2-201ENST00000561729 223 ntBASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 AC145350.3-201ENST00000569033 163 ntBASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RAI1Q7Z5J4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 AC073111.5-205ENST00000641717 521 ntBASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 AP004607.4-201ENST00000530158 1459 ntBASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RAI1Q7Z5J4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAI1Q7Z5J4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 LINC02228-203ENST00000641970 1355 ntBASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 AC004687.1-201ENST00000579003 1625 ntBASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAI1Q7Z5J4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 HLA-L-209ENST00000420110 1011 ntBASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 AC068587.7-201ENST00000641602 218 ntBASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RAI1Q7Z5J4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms