Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C11orf88Q6PI97 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
C11orf88Q6PI97 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C11orf88Q6PI97 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C11orf88Q6PI97 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
C11orf88Q6PI97 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.89■□□□□ 0.62
C11orf88Q6PI97 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
C11orf88Q6PI97 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
C11orf88Q6PI97 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 ESRRAP2-201ENST00000418437 1549 ntBASIC18.89■□□□□ 0.61
C11orf88Q6PI97 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C11orf88Q6PI97 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 KRT125P-201ENST00000546827 989 ntBASIC18.88■□□□□ 0.61
C11orf88Q6PI97 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
C11orf88Q6PI97 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 KRT18P24-201ENST00000344739 1156 ntBASIC18.87■□□□□ 0.61
C11orf88Q6PI97 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 BX664725.1-201ENST00000438252 379 ntBASIC18.87■□□□□ 0.61
C11orf88Q6PI97 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
C11orf88Q6PI97 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
C11orf88Q6PI97 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms