Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L2-201ENST00000561772 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 CCDC92B-201ENST00000575506 885 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L6-201ENST00000626483 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L1-201ENST00000627662 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L8-201ENST00000629013 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L3-201ENST00000630187 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L7-201ENST00000630678 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 DUX4L5-201ENST00000630834 1275 ntBASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC27A1Q6PCB7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC27A1Q6PCB7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC27A1Q6PCB7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
SLC27A1Q6PCB7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
SLC27A1Q6PCB7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
SLC27A1Q6PCB7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.81■■□□□ 1.4
SLC27A1Q6PCB7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 TERF1P2-201ENST00000583350 1212 ntBASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC27A1Q6PCB7 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 SMUG1P1-201ENST00000590640 811 ntBASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC27A1Q6PCB7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SLC27A1Q6PCB7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 LINC01960-201ENST00000563759 1884 ntBASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 KRT18P5-201ENST00000436075 1291 ntBASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 KRT18P14-201ENST00000534205 1250 ntBASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.77■■□□□ 1.4
SLC27A1Q6PCB7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 BX005040.4-201ENST00000637145 1518 ntBASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SLC27A1Q6PCB7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SLC27A1Q6PCB7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms