Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.53■□□□□ 0.24
MRPL54Q6P161 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL54Q6P161 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
MRPL54Q6P161 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
MRPL54Q6P161 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL54Q6P161 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL54Q6P161 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL54Q6P161 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL54Q6P161 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.52■□□□□ 0.24
MRPL54Q6P161 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL54Q6P161 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
MRPL54Q6P161 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
MRPL54Q6P161 HGH1-207ENST00000628266 258 ntTSL 5 BASIC16.52■□□□□ 0.24
MRPL54Q6P161 SMPD5-203ENST00000639008 1464 ntBASIC16.52■□□□□ 0.23
MRPL54Q6P161 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL54Q6P161 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.52■□□□□ 0.23
MRPL54Q6P161 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MRPL54Q6P161 AL022069.1-201ENST00000568025 1636 ntBASIC16.52■□□□□ 0.23
MRPL54Q6P161 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
MRPL54Q6P161 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MRPL54Q6P161 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
MRPL54Q6P161 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPL54Q6P161 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 AC090877.2-201ENST00000558441 1738 ntBASIC16.51■□□□□ 0.23
MRPL54Q6P161 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPL54Q6P161 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
MRPL54Q6P161 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPL54Q6P161 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MRPL54Q6P161 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.5■□□□□ 0.23
MRPL54Q6P161 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL54Q6P161 ALDH1A3-203ENST00000557963 1670 ntBASIC16.5■□□□□ 0.23
MRPL54Q6P161 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL54Q6P161 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL54Q6P161 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.5■□□□□ 0.23
MRPL54Q6P161 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MRPL54Q6P161 KRT18P10-201ENST00000388836 1287 ntBASIC16.5■□□□□ 0.23
MRPL54Q6P161 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.5■□□□□ 0.23
MRPL54Q6P161 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL54Q6P161 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
MRPL54Q6P161 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL54Q6P161 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL54Q6P161 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
MRPL54Q6P161 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL54Q6P161 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL54Q6P161 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.49■□□□□ 0.23
MRPL54Q6P161 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL54Q6P161 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.48■□□□□ 0.23
MRPL54Q6P161 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 AC087742.1-201ENST00000575880 1738 ntBASIC16.47■□□□□ 0.23
MRPL54Q6P161 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
MRPL54Q6P161 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL54Q6P161 LINC01521-201ENST00000504184 1943 ntBASIC16.47■□□□□ 0.23
MRPL54Q6P161 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms